Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc6a17 MGP_CAROLIEiJ_G0025503

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Description

solute carrier family 6 (neurotransmitter transporter), member 17 [Source:MGI Symbol;Acc:MGI:2442535]

Location

Chromosome 3: 101,665,389-101,714,119 reverse strand.

CAROLI_EIJ_v1.1:LT608232.1

About this gene

This gene has 10 transcripts (splice variants), 268 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0059838.1	Slc6a17-201	6371	727aa	MGP_CAROLIEiJ_P0059838	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P7QX34	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0059839.1	Slc6a17-202	6357	724aa	MGP_CAROLIEiJ_P0059839	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0059846.1	Slc6a17-209	513	116aa	MGP_CAROLIEiJ_P0059846	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0059840.1	Slc6a17-203	4184	686aa	MGP_CAROLIEiJ_P0059840	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0059842.1	Slc6a17-205	3085	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0059841.1	Slc6a17-204	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0059843.1	Slc6a17-206	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0059845.1	Slc6a17-208	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0059847.1	Slc6a17-210	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0059844.1	Slc6a17-207	2986	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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