Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Dclk1 MGP_CAROLIEiJ_G0025001

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Description

doublecortin-like kinase 1 [Source:MGI Symbol;Acc:MGI:1330861]

Location

Chromosome 3: 48,821,062-49,117,877 forward strand.

CAROLI_EIJ_v1.1:LT608232.1

About this gene

This gene has 15 transcripts (splice variants), 288 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0057714.1	Dclk1-203	7848	756aa	MGP_CAROLIEiJ_P0057714	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5PIR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0057713.1	Dclk1-201	7963	739aa	MGP_CAROLIEiJ_P0057713	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0057721.1	Dclk1-209	7002	422aa	MGP_CAROLIEiJ_P0057721	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5P8M8	-
MGP_CAROLIEiJ_T0057715.1	Dclk1-202	6004	363aa	MGP_CAROLIEiJ_P0057715	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5PIR7	-
MGP_CAROLIEiJ_T0057720.1	Dclk1-208	5164	56aa	MGP_CAROLIEiJ_P0057720	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5PD18	-
MGP_CAROLIEiJ_T0057723.1	Dclk1-213	4314	449aa	MGP_CAROLIEiJ_P0057723	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5PFC5	-
MGP_CAROLIEiJ_T0057722.1	Dclk1-210	4281	432aa	MGP_CAROLIEiJ_P0057722	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0057725.1	Dclk1-212	2911	421aa	MGP_CAROLIEiJ_P0057725	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0057726.1	Dclk1-214	1650	452aa	MGP_CAROLIEiJ_P0057726	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0057724.1	Dclk1-211	1487	382aa	MGP_CAROLIEiJ_P0057724	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0057716.1	Dclk1-204	854	247aa	MGP_CAROLIEiJ_P0057716	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0057727.1	Dclk1-215	907	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0057718.1	Dclk1-206	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0057719.1	Dclk1-207	1417	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0057717.1	Dclk1-205	779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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