Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Skap1 MGP_CAROLIEiJ_G0017033

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Description

src family associated phosphoprotein 1 [Source:MGI Symbol;Acc:MGI:1925723]

Location

Chromosome 11: 92,233,930-92,529,584 forward strand.

CAROLI_EIJ_v1.1:LT608241.1

About this gene

This gene has 10 transcripts (splice variants), 196 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0029436.1	Skap1-201	1549	339aa	MGP_CAROLIEiJ_P0029436	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0029440.1	Skap1-205	1871	167aa	MGP_CAROLIEiJ_P0029440	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0029439.1	Skap1-204	1456	339aa	MGP_CAROLIEiJ_P0029439	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5QQ96	-
MGP_CAROLIEiJ_T0029437.1	Skap1-202	1105	78aa	MGP_CAROLIEiJ_P0029437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0029441.1	Skap1-206	715	126aa	MGP_CAROLIEiJ_P0029441	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0029443.1	Skap1-208	2093	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0029438.1	Skap1-203	2069	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0029445.1	Skap1-210	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0029444.1	Skap1-209	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0029442.1	Skap1-207	1393	355aa	MGP_CAROLIEiJ_P0029442	Unknown likely coding	A0A6P7RWG7	-

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Summary

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