Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pip5k1c MGP_CAROLIEiJ_G0015632

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Description

phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma [Source:MGI Symbol;Acc:MGI:1298224]

Location

Chromosome 10: 75,293,043-75,320,408 forward strand.

CAROLI_EIJ_v1.1:LT608233.1

About this gene

This gene has 10 transcripts (splice variants), 264 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0024108.1	Pip5k1c-205	4315	687aa	MGP_CAROLIEiJ_P0024108	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5QG92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0024104.1	Pip5k1c-201	4200	635aa	MGP_CAROLIEiJ_P0024104	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5QMF4	-
MGP_CAROLIEiJ_T0024105.1	Pip5k1c-202	2564	661aa	MGP_CAROLIEiJ_P0024105	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5Q9K4	-
MGP_CAROLIEiJ_T0024109.1	Pip5k1c-206	649	216aa	MGP_CAROLIEiJ_P0024109	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0024107.1	Pip5k1c-204	4250	100aa	MGP_CAROLIEiJ_P0024107	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0024106.1	Pip5k1c-203	922	61aa	MGP_CAROLIEiJ_P0024106	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0024111.1	Pip5k1c-208	875	132aa	MGP_CAROLIEiJ_P0024111	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0024110.1	Pip5k1c-207	692	73aa	MGP_CAROLIEiJ_P0024110	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0024112.1	Pip5k1c-209	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0024113.1	Pip5k1c-210	824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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