Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Prdm1 MGP_CAROLIEiJ_G0015295

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Description

PR domain containing 1, with ZNF domain [Source:MGI Symbol;Acc:MGI:99655]

Location

Chromosome 10: 39,984,868-40,081,153 reverse strand.

CAROLI_EIJ_v1.1:LT608233.1

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0022819.1	Prdm1-201	5255	856aa	MGP_CAROLIEiJ_P0022819	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5QQ41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0022820.1	Prdm1-202	4026	823aa	MGP_CAROLIEiJ_P0022820	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5QIZ3	-
MGP_CAROLIEiJ_T0022822.1	Prdm1-204	820	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0022821.1	Prdm1-203	2517	838aa	MGP_CAROLIEiJ_P0022821	Unknown likely coding	-	-

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Summary

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