Description
autophagy related 16 like 1 [Source:MGI Symbol;Acc:MGI:1924290]
Location
Chromosome 1: 80,232,197-80,275,575 forward strand.
CAROLI_EIJ_v1.1:LT608242.1
About this gene
This gene has 10 transcripts (splice variants), 206 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| MGP_CAROLIEiJ_T0018932.1 | Atg16l1-206 | 3104 | 623aa | MGP_CAROLIEiJ_P0018932 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6P7QXF1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_CAROLIEiJ_T0018928.1 | Atg16l1-202 | 3133 | 607aa | MGP_CAROLIEiJ_P0018928 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6P5P577 | - |
| MGP_CAROLIEiJ_T0018931.1 | Atg16l1-205 | 3006 | 588aa | MGP_CAROLIEiJ_P0018931 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6P5PBE5 | - |
| MGP_CAROLIEiJ_T0018927.1 | Atg16l1-201 | 750 | 154aa | MGP_CAROLIEiJ_P0018927 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| MGP_CAROLIEiJ_T0018929.1 | Atg16l1-203 | 3703 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
| MGP_CAROLIEiJ_T0018933.1 | Atg16l1-207 | 3338 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
| MGP_CAROLIEiJ_T0018934.1 | Atg16l1-208 | 1666 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
| MGP_CAROLIEiJ_T0018930.1 | Atg16l1-204 | 1586 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
| MGP_CAROLIEiJ_T0018935.1 | Atg16l1-209 | 637 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
| MGP_CAROLIEiJ_T0018936.1 | Atg16l1-210 | 332 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |
