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Transcript: MGP_C57BL6NJ_T0095390.1

Description

chondroitin sulfate proteoglycan 5 [Source:MGI Symbol;Acc:MGI:1352747]

Gene Synonyms

CALEB, Caleb, NGC, Ngc, neuroglycan C

Location

Chromosome 9: 115,430,530-115,446,610 forward strand.

Reference strain equivalent

Cspg5

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features and maps to 219 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0035841.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0095392.1-7857569aaMGP_C57BL6NJ_P0095392
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0095390.1-3870566aaMGP_C57BL6NJ_P0095390
 
Protein coding
CCDS52936, CCDS81085Q71M36 -
MGP_C57BL6NJ_T0095393.1-1977539aaMGP_C57BL6NJ_P0095393
 
Protein coding
--
MGP_C57BL6NJ_T0095391.1-1523No protein-
 
Retained intron
--

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,870 bps, Translation length: 566 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q71M36

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS52936, CCDS81085

Version

MGP_C57BL6NJ_T0095390.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.