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Transcript: MGP_C57BL6NJ_T0093390.1

Description

PIF1 5'-to-3' DNA helicase [Source:MGI Symbol;Acc:MGI:2143057]

Gene Synonyms

4631410M14, AI449441

Location

Chromosome 9: 67,127,234-67,135,759 forward strand.

Reference strain equivalent

Pif1

About this transcript

This transcript has 13 exons, is annotated with 14 domains and features and maps to 209 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0035455.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0093394.1-3685650aaMGP_C57BL6NJ_P0093394
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0093390.1-3395650aaMGP_C57BL6NJ_P0093390
 
Protein coding
CCDS23295D3YZ87 D6RFC6 Q80SX8
-
MGP_C57BL6NJ_T0093396.1-3309650aaMGP_C57BL6NJ_P0093396
 
Protein coding
--
MGP_C57BL6NJ_T0093397.1-742157aaMGP_C57BL6NJ_P0093397
 
Protein coding
--
MGP_C57BL6NJ_T0093391.1-3719aaMGP_C57BL6NJ_P0093391
 
Protein coding
--
MGP_C57BL6NJ_T0093392.1-3725411aaMGP_C57BL6NJ_P0093392
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0093395.1-3897No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0093393.1-2450No protein-
 
Retained intron
--

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 3,395 bps, Translation length: 650 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80SX8

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS23295

Version

MGP_C57BL6NJ_T0093390.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.