Transcript: MGP_C57BL6NJ_T0093004.1

Description

proline-serine-threonine phosphatase-interacting protein 1 [Source:MGI Symbol;Acc:MGI:1321396]

Gene Synonyms

CD2BP1, def-2

Location

Chromosome 9: 56,780,576-56,825,355 forward strand.

Reference strain equivalent

Pstpip1

About this transcript

This transcript has 15 exons, is annotated with 24 domains and features and maps to 268 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0035339.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0093004.1	-	1863	415aa	MGP_C57BL6NJ_P0093004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40645	A0A0R4J0P5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0093007.1	-	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0093006.1	-	2822	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0093005.1	-	2637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0093008.1	-	841	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0093010.1	-	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0093009.1	-	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,863 bps, Translation length: 415 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS40645

Version

MGP_C57BL6NJ_T0093004.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0093004.1

Summary

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Transcript: MGP_C57BL6NJ_T0093004.1

Summary

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