Transcript: MGP_C57BL6NJ_T0090886.1

Description

vacuolar protein sorting 4A [Source:MGI Symbol;Acc:MGI:1890520]

Gene Synonyms

4930589C15Rik, AI325971, AW553189

Location

Chromosome 8: 113,437,243-113,452,501 forward strand.

Reference strain equivalent

Vps4a

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features and maps to 239 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0034585.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0090886.1	-	2154	510aa	MGP_C57BL6NJ_P0090886	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40463	Q8VEJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0090888.1	-	636	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0090887.1	-	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,154 bps, Translation length: 510 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VEJ9

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS40463

Version

MGP_C57BL6NJ_T0090886.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0090886.1

Summary

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Transcript: MGP_C57BL6NJ_T0090886.1

Summary

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