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Transcript: MGP_C57BL6NJ_T0090664.1

Description

cadherin 8 [Source:MGI Symbol;Acc:MGI:107434]

Gene Synonyms

AI851472, cad8

Location

Chromosome 8: 104,373,361-104,790,801 reverse strand.

Reference strain equivalent

Cdh8

About this transcript

This transcript has 13 exons, is annotated with 51 domains and features and maps to 204 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0034492.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0090667.1-4594799aaMGP_C57BL6NJ_P0090667
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0090666.1-3790716aaMGP_C57BL6NJ_P0090666
 
Protein coding
--
MGP_C57BL6NJ_T0090670.1-3216247aaMGP_C57BL6NJ_P0090670
 
Protein coding
--
MGP_C57BL6NJ_T0090664.1-3175754aaMGP_C57BL6NJ_P0090664
 
Protein coding
CCDS22569, CCDS40448, CCDS72155, CCDS72156D6RG94 E9PYB2 E9PZC1
E9Q451 P97291 Q8C449
-
MGP_C57BL6NJ_T0090665.1-2711711aaMGP_C57BL6NJ_P0090665
 
Protein coding
--
MGP_C57BL6NJ_T0090668.1-4320509aaMGP_C57BL6NJ_P0090668
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0090669.1-1410No protein-
 
Retained intron
--

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 3,175 bps, Translation length: 754 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P97291

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS22569, CCDS40448, CCDS72155, CCDS72156

Version

MGP_C57BL6NJ_T0090664.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.