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Transcript: MGP_C57BL6NJ_T0088638.1

Description

carbohydrate kinase domain containing [Source:MGI Symbol;Acc:MGI:1913353]

Gene Synonyms

0710008K08Rik, 2810407E01Rik, Naxd

Location

Chromosome 8: 9,060,070-9,077,455 forward strand.

Reference strain equivalent

Naxd

About this transcript

This transcript has 9 exons, is annotated with 4 domains and features and maps to 221 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0033847.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0088639.1-1359365aaMGP_C57BL6NJ_P0088639
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0088640.1-984327aaMGP_C57BL6NJ_P0088640
 
Protein coding
--
MGP_C57BL6NJ_T0088638.1-283079aaMGP_C57BL6NJ_P0088638
 
Nonsense mediated decay
CCDS22096, CCDS57604, CCDS80857J3QMM7 J3QN06 J3QPU6
K3W4M4 		-
MGP_C57BL6NJ_T0088643.1-759No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0088642.1-749No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0088641.1-684No protein-
 
Retained intron
--

Summary

Statistics

Exons: 9, Coding exons: 3, Transcript length: 2,830 bps, Translation length: 79 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS22096, CCDS57604, CCDS80857

Version

MGP_C57BL6NJ_T0088638.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.