Transcript: MGP_C57BL6NJ_T0086587.1

Description

ribosomal protein S13 [Source:MGI Symbol;Acc:MGI:1915302]

Gene Synonyms

2700063M04Rik

Location

Chromosome 7: 124,879,179-124,881,865 reverse strand.

Reference strain equivalent

Rps13

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features and maps to 320 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0033384.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0086587.1	-	589	151aa	MGP_C57BL6NJ_P0086587	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52370	A0A0U1RQ71 P62301 Q5BLJ7 Q921R2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0086588.1	-	1313	140aa	MGP_C57BL6NJ_P0086588	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0086592.1	-	1150	53aa	MGP_C57BL6NJ_P0086592	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0086591.1	-	2359	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0086593.1	-	1927	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0086594.1	-	958	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0086590.1	-	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0086589.1	-	428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 589 bps, Translation length: 151 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62301

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS52370

Version

MGP_C57BL6NJ_T0086587.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0086587.1

Summary

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Transcript: MGP_C57BL6NJ_T0086587.1

Summary

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