Transcript: MGP_C57BL6NJ_T0081886.1

Description

suppressor of variegation 4-20 homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:2385262]

Gene Synonyms

BC024816, KMT5C, Suv4-20h2

Location

Chromosome 7: 1,733,283-1,740,681 forward strand.

Reference strain equivalent

Kmt5c

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features and maps to 232 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0032000.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0081889.1	-	2774	468aa	MGP_C57BL6NJ_P0081889	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0081886.1	-	2189	468aa	MGP_C57BL6NJ_P0081886	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20743	D3Z2F5 E0CXW4 F6XZN9 Q6Q783	-
MGP_C57BL6NJ_T0081890.1	-	2177	468aa	MGP_C57BL6NJ_P0081890	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0081888.1	-	767	164aa	MGP_C57BL6NJ_P0081888	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0081897.1	-	571	147aa	MGP_C57BL6NJ_P0081897	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0081892.1	-	1270	145aa	MGP_C57BL6NJ_P0081892	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0081894.1	-	892	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0081891.1	-	763	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0081893.1	-	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0081895.1	-	595	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0081896.1	-	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0081887.1	-	396	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,189 bps, Translation length: 468 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6Q783

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS20743

Version

MGP_C57BL6NJ_T0081886.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0081886.1

Summary

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Transcript: MGP_C57BL6NJ_T0081886.1

Summary

About Us

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