Transcript: MGP_C57BL6NJ_T0080845.1

Description

integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]

Gene Synonyms

2700050P07Rik, AI646725

Location

Chromosome 6: 135,450,187-135,466,989 reverse strand.

Reference strain equivalent

Itfg2

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features and maps to 230 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031763.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0080845.1	-	2130	435aa	MGP_C57BL6NJ_P0080845	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20572	A0A0N4SUV5 A0A0N4SVX2 A0A0N4SW06 A0A0N4SW62 Q3TWL5 Q91WI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0080847.1	-	3001	358aa	MGP_C57BL6NJ_P0080847	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0080848.1	-	1301	403aa	MGP_C57BL6NJ_P0080848	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0080846.1	-	274	7aa	MGP_C57BL6NJ_P0080846	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0080850.1	-	724	87aa	MGP_C57BL6NJ_P0080850	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0080851.1	-	655	136aa	MGP_C57BL6NJ_P0080851	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0080852.1	-	2296	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0080853.1	-	2036	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0080849.1	-	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,130 bps, Translation length: 435 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91WI7

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS20572

Version

MGP_C57BL6NJ_T0080845.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0080845.1

Summary

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Transcript: MGP_C57BL6NJ_T0080845.1

Summary

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