Transcript: MGP_C57BL6NJ_T0080171.1

Description

calcium channel, voltage-dependent, alpha 2/delta subunit 4 [Source:MGI Symbol;Acc:MGI:2442632]

Gene Synonyms

5730412N02Rik, BE686333

Location

Chromosome 6: 125,138,385-125,260,568 forward strand.

Reference strain equivalent

Cacna2d4

About this transcript

This transcript has 38 exons, is annotated with 17 domains and features and maps to 350 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031629.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0080171.1	-	5803	1144aa	MGP_C57BL6NJ_P0080171	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51886	A0A087WQH4 F8VPL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0080173.1	-	3710	1119aa	MGP_C57BL6NJ_P0080173	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0080174.1	-	2578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0080185.1	-	761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0080175.1	-	748	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0080182.1	-	448	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0080176.1	-	404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0080172.1	-	3229	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0080183.1	-	419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0080177.1	-	414	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0080184.1	-	924	282aa	MGP_C57BL6NJ_P0080184	Unknown likely coding		-	-

Summary

Statistics

Exons: 38, Coding exons: 38, Transcript length: 5,803 bps, Translation length: 1,144 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS51886

Version

MGP_C57BL6NJ_T0080171.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0080171.1

Summary

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Transcript: MGP_C57BL6NJ_T0080171.1

Summary

About Us

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