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Transcript: MGP_C57BL6NJ_T0080090.1

Description

chemokine (C-X-C motif) ligand 12 [Source:MGI Symbol;Acc:MGI:103556]

Gene Synonyms

PBSF, PBSF/SDF-1, Pbsf, SDF-1, Scyb12, Sdf1, Sdf1a, Sdf1b, TLSF-a, TLSF-b, TPAR1, Tlsf, Tpar1

Location

Chromosome 6: 122,914,398-122,920,931 forward strand.

Reference strain equivalent

Cxcl12

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features and maps to 152 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031615.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0080093.1-5627119aaMGP_C57BL6NJ_P0080093
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0080091.1-313293aaMGP_C57BL6NJ_P0080091
 
Protein coding
--
MGP_C57BL6NJ_T0080090.1-187889aaMGP_C57BL6NJ_P0080090
 
Protein coding
CCDS20463, CCDS39605, CCDS39606H7BX38 P40224 -
MGP_C57BL6NJ_T0080092.1-2894No protein-
 
Retained intron
--

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,878 bps, Translation length: 89 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P40224

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS20463, CCDS39605, CCDS39606

Version

MGP_C57BL6NJ_T0080090.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.