Transcript: MGP_C57BL6NJ_T0080018.1

Description

plexin D1 [Source:MGI Symbol;Acc:MGI:2154244]

Gene Synonyms

6230425C21Rik, b2b1863Clo, b2b553Clo

Location

Chromosome 6: 121,622,838-121,663,217 reverse strand.

Reference strain equivalent

Plxnd1

About this transcript

This transcript has 36 exons, is annotated with 46 domains and features and maps to 385 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031600.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0080018.1	-	6907	1925aa	MGP_C57BL6NJ_P0080018	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20448	F6T0L5 Q3UH93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0080022.1	-	700	232aa	MGP_C57BL6NJ_P0080022	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0080019.1	-	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0080021.1	-	442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0080020.1	-	417	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 36, Coding exons: 36, Transcript length: 6,907 bps, Translation length: 1,925 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UH93

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS20448

Version

MGP_C57BL6NJ_T0080018.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0080018.1

Summary

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Transcript: MGP_C57BL6NJ_T0080018.1

Summary

About Us

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