Transcript: MGP_C57BL6NJ_T0079805.1

Description

RNA pseudouridylate synthase domain containing 3 [Source:MGI Symbol;Acc:MGI:2141440]

Gene Synonyms

AI527266

Location

Chromosome 6: 118,938,770-118,942,750 reverse strand.

Reference strain equivalent

Rpusd3

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features and maps to 167 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031561.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0079805.1	-	1228	344aa	MGP_C57BL6NJ_P0079805	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51872	B7ZMQ0 D3YVC8 F6UDW0 F6WLR1 Q14AI6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0079807.1	-	1045	315aa	MGP_C57BL6NJ_P0079807	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0079808.1	-	805	268aa	MGP_C57BL6NJ_P0079808	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0079810.1	-	549	182aa	MGP_C57BL6NJ_P0079810	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0079812.1	-	365	117aa	MGP_C57BL6NJ_P0079812	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0079809.1	-	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0079813.1	-	752	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0079811.1	-	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0079806.1	-	321	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,228 bps, Translation length: 344 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14AI6

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS51872

Version

MGP_C57BL6NJ_T0079805.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0079805.1

Summary

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Transcript: MGP_C57BL6NJ_T0079805.1

Summary

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