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Transcript: MGP_C57BL6NJ_T0079611.1

Description

PDZ domain containing RING finger 3 [Source:MGI Symbol;Acc:MGI:1933157]

Gene Synonyms

1110020C07Rik, AI429718, AL023082, Kiaa1095, LNX3, SEMACAP3, Semcap3, semaphorin cytoplasmic domain-associated protein 3A

Location

Chromosome 6: 105,828,736-106,072,324 reverse strand.

Reference strain equivalent

Pdzrn3

About this transcript

This transcript has 10 exons, is annotated with 32 domains and features and maps to 193 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031528.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0079611.1-41041063aaMGP_C57BL6NJ_P0079611
 
Protein coding
CCDS20392Q69ZS0 Ensembl Canonical
MGP_C57BL6NJ_T0079613.1-666No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0079615.1-621No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0079614.1-2969No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0079612.1-3245780aaMGP_C57BL6NJ_P0079612
 
Unknown likely coding
--

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,104 bps, Translation length: 1,063 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q69ZS0

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS20392

Version

MGP_C57BL6NJ_T0079611.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.