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Transcript: MGP_C57BL6NJ_T0079139.1

Description

aprataxin and PNKP like factor [Source:MGI Symbol;Acc:MGI:1919353]

Gene Synonyms

2010301N04Rik, AI452191

Location

Chromosome 6: 91,367,120-91,414,419 reverse strand.

Reference strain equivalent

Aplf

About this transcript

This transcript has 11 exons, is annotated with 21 domains and features and maps to 252 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031431.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0079141.1-1889499aaMGP_C57BL6NJ_P0079141
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0079139.1-2955478aaMGP_C57BL6NJ_P0079139
 
Protein coding
CCDS20324, CCDS51839A0A0N4SW39 Q9D842 -
MGP_C57BL6NJ_T0079140.1-158744aaMGP_C57BL6NJ_P0079140
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0079142.1-3588No protein-
 
Retained intron
--

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,955 bps, Translation length: 478 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D842

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS20324, CCDS51839

Version

MGP_C57BL6NJ_T0079139.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.