Transcript: MGP_C57BL6NJ_T0078916.1

Description

exocyst complex component 6B [Source:MGI Symbol;Acc:MGI:1923164]

Gene Synonyms

4930569O18Rik, G430127E12Rik, Sec15b, Sec15l2, mKIAA0919

Location

Chromosome 6: 88,076,434-88,560,674 reverse strand.

Reference strain equivalent

Exoc6b

About this transcript

This transcript has 22 exons, is annotated with 12 domains and features and maps to 295 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031385.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0078916.1	-	5439	810aa	MGP_C57BL6NJ_P0078916	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51824	A6H5Z3 E0CY34	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0078919.1	-	1383	39aa	MGP_C57BL6NJ_P0078919	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0078921.1	-	1565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0078920.1	-	3987	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0078917.1	-	3792	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0078918.1	-	3540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0078922.1	-	3110	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0078923.1	-	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 5,439 bps, Translation length: 810 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6H5Z3

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS51824

Version

MGP_C57BL6NJ_T0078916.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0078916.1

Summary

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Transcript: MGP_C57BL6NJ_T0078916.1

Summary

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