Mouse C57BL/6NJ (C57BL_6NJ_v1)
Description

SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:MGI Symbol;Acc:MGI:95453]

Gene Synonyms

AV081750, AW226546, D6Pas1, Etl1, Kiaa1122, mKIAA1122

Location
Reference strain equivalent
About this transcript

This transcript has 4 exons, is annotated with 9 domains and features and maps to 76 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0078332.1-51681021aaMGP_C57BL6NJ_P0078332
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0078335.1-73473aaMGP_C57BL6NJ_P0078335
 
Protein coding
--
MGP_C57BL6NJ_T0078331.1-602134aaMGP_C57BL6NJ_P0078331
 
Protein coding
CCDS20204A0A0N4SUP7 A0A0N4SUQ5 A0A0N4SVP9
A0A0N4SVS7 A0A0N4SVV9 Q04692
-
MGP_C57BL6NJ_T0078334.1-60073aaMGP_C57BL6NJ_P0078334
 
Protein coding
--
MGP_C57BL6NJ_T0078339.1-4179123aaMGP_C57BL6NJ_P0078339
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0078337.1-73973aaMGP_C57BL6NJ_P0078337
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0078342.1-72645aaMGP_C57BL6NJ_P0078342
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0078336.1-47268aaMGP_C57BL6NJ_P0078336
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0078338.1-2821No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0078341.1-635No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0078343.1-3062No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0078345.1-2526No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0078340.1-643No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0078344.1-643No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0078333.1-466No protein-
 
Retained intron
--
Statistics

Exons: 4, Coding exons: 3, Transcript length: 602 bps, Translation length: 134 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q04692

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS20204

Version

MGP_C57BL6NJ_T0078331.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.