Mouse C57BL/6NJ (C57BL_6NJ_v1)
Description

phosphodiesterase 1C [Source:MGI Symbol;Acc:MGI:108413]

Location
Reference strain equivalent
About this transcript

This transcript has 19 exons, is annotated with 30 domains and features and maps to 313 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0078188.1-3147766aaMGP_C57BL6NJ_P0078188
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0078194.1-8766631aaMGP_C57BL6NJ_P0078194
 
Protein coding
--
MGP_C57BL6NJ_T0078190.1-6821654aaMGP_C57BL6NJ_P0078190
 
Protein coding
--
MGP_C57BL6NJ_T0078195.1-4728603aaMGP_C57BL6NJ_P0078195
 
Protein coding
--
MGP_C57BL6NJ_T0078187.1-3907706aaMGP_C57BL6NJ_P0078187
 
Protein coding
CCDS20170, CCDS51783, CCDS51784, CCDS51785, CCDS51786, CCDS51787A0A0N4SW87 A0A0N4SWG4 E9Q7V6
Q5D0E7 Q64338 Q8CDV2
Q9D5W0
-
MGP_C57BL6NJ_T0078196.1-3449631aaMGP_C57BL6NJ_P0078196
 
Protein coding
--
MGP_C57BL6NJ_T0078197.1-3068622aaMGP_C57BL6NJ_P0078197
 
Protein coding
--
MGP_C57BL6NJ_T0078191.1-2132617aaMGP_C57BL6NJ_P0078191
 
Protein coding
--
MGP_C57BL6NJ_T0078193.1-2126654aaMGP_C57BL6NJ_P0078193
 
Protein coding
--
MGP_C57BL6NJ_T0078192.1-44246aaMGP_C57BL6NJ_P0078192
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0078189.1-2086No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0078199.1-3935No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0078198.1-1429No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0078200.1-329No protein-
 
Retained intron
--
Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,907 bps, Translation length: 706 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q64338

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS20170, CCDS51783, CCDS51784, CCDS51785, CCDS51786, CCDS51787

Version

MGP_C57BL6NJ_T0078187.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.