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Transcript: MGP_C57BL6NJ_T0075825.1

Description

TATA-box binding protein associated factor 6 [Source:MGI Symbol;Acc:MGI:109129]

Gene Synonyms

80kDa, AW549759, TAF(II)80, TAFII70, Taf2e, p80

Location

Chromosome 5: 148,327,975-148,336,583 reverse strand.

Reference strain equivalent

Taf6

About this transcript

This transcript has 15 exons, is annotated with 26 domains and features and maps to 245 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0030688.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0075826.1-2308678aaMGP_C57BL6NJ_P0075826
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0075825.1-2304678aaMGP_C57BL6NJ_P0075825
 
Protein coding
CCDS19795D3Z0T0 D3Z4X5 D3Z5H6
Q62311 S4R1R2 		-
MGP_C57BL6NJ_T0075827.1-2093636aaMGP_C57BL6NJ_P0075827
 
Protein coding
--
MGP_C57BL6NJ_T0075830.1-968214aaMGP_C57BL6NJ_P0075830
 
Protein coding
--
MGP_C57BL6NJ_T0075831.1-35755aaMGP_C57BL6NJ_P0075831
 
Protein coding
--
MGP_C57BL6NJ_T0075828.1-2619114aaMGP_C57BL6NJ_P0075828
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0075832.1-1139No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0075829.1-1220No protein-
 
Retained intron
--

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,304 bps, Translation length: 678 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62311

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS19795

Version

MGP_C57BL6NJ_T0075825.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.