Transcript: MGP_C57BL6NJ_T0075748.1

Description

TSC22 domain family, member 4 [Source:MGI Symbol;Acc:MGI:1926079]

Gene Synonyms

0610009M14Rik, 1700023B23Rik, AI415410, Thg-1pit, Thg1pit, Tilz2

Location

Chromosome 5: 147,803,156-147,826,709 forward strand.

Reference strain equivalent

Spacdr

About this transcript

This transcript has 7 exons, is annotated with 24 domains and features and maps to 142 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0030672.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0075748.1	-	2730	509aa	MGP_C57BL6NJ_P0075748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19776, CCDS57393	D3YZZ4 D3Z6V5 F6VXN4 Q3U1U6 Q9DA18 Q9EQN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0075750.1	-	3983	387aa	MGP_C57BL6NJ_P0075750	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0075754.1	-	1043	149aa	MGP_C57BL6NJ_P0075754	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0075755.1	-	1043	210aa	MGP_C57BL6NJ_P0075755	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0075753.1	-	790	168aa	MGP_C57BL6NJ_P0075753	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0075752.1	-	563	96aa	MGP_C57BL6NJ_P0075752	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0075756.1	-	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0075749.1	-	2989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0075751.1	-	402	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,730 bps, Translation length: 509 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9EQN3

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS19776, CCDS57393

Version

MGP_C57BL6NJ_T0075748.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0075748.1

Summary

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Transcript: MGP_C57BL6NJ_T0075748.1

Summary

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