Transcript: MGP_C57BL6NJ_T0074642.1

Description

purinergic receptor P2X, ligand-gated ion channel 4 [Source:MGI Symbol;Acc:MGI:1338859]

Gene Synonyms

AI504491, AW555605, D5Ertd444e, P2X4

Location

Chromosome 5: 131,233,236-131,258,365 forward strand.

Reference strain equivalent

P2rx4

About this transcript

This transcript has 13 exons, is annotated with 31 domains and features and maps to 293 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0030485.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0074642.1	-	2702	388aa	MGP_C57BL6NJ_P0074642	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19654, CCDS80392, CCDS80393	A0A0G2JEP2 D3YYR5 D3Z5U5 Q9Z256 Q9Z257	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0074646.1	-	1887	361aa	MGP_C57BL6NJ_P0074646	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0074648.1	-	1111	366aa	MGP_C57BL6NJ_P0074648	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0074649.1	-	1030	339aa	MGP_C57BL6NJ_P0074649	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0074645.1	-	810	52aa	MGP_C57BL6NJ_P0074645	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0074651.1	-	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0074643.1	-	3895	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0074644.1	-	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0074650.1	-	513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0074647.1	-	1167	388aa	MGP_C57BL6NJ_P0074647	Unknown likely coding		-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,702 bps, Translation length: 388 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS19654, CCDS80392, CCDS80393

Version

MGP_C57BL6NJ_T0074642.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0074642.1

Summary

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Transcript: MGP_C57BL6NJ_T0074642.1

Summary

About Us

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