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Transcript: MGP_C57BL6NJ_T0072217.1

Description

protocadherin 7 [Source:MGI Symbol;Acc:MGI:1860487]

Gene Synonyms

BH-protocadherin

Location

Chromosome 5: 59,295,663-59,771,275 forward strand.

Reference strain equivalent

Pcdh7

About this transcript

This transcript has 3 exons, is annotated with 76 domains and features and maps to 284 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0029989.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0072217.1-87851255aaMGP_C57BL6NJ_P0072217
 
Protein coding
CCDS19296, CCDS51505, CCDS80286A0A0A6YW34 A0A0A6YWD5 A0A0A6YY48
A0A0A6YY83 A0A0G2JG16 A2RS43
E9Q2S0 		Ensembl Canonical
MGP_C57BL6NJ_T0072218.1-56111069aaMGP_C57BL6NJ_P0072218
 
Protein coding
--
MGP_C57BL6NJ_T0072219.1-37521247aaMGP_C57BL6NJ_P0072219
 
Protein coding
--
MGP_C57BL6NJ_T0072220.1-2602801aaMGP_C57BL6NJ_P0072220
 
Protein coding
--
MGP_C57BL6NJ_T0072223.1-863124aaMGP_C57BL6NJ_P0072223
 
Protein coding
--
MGP_C57BL6NJ_T0072222.1-659171aaMGP_C57BL6NJ_P0072222
 
Protein coding
--
MGP_C57BL6NJ_T0072221.1-2199378aaMGP_C57BL6NJ_P0072221
 
Nonsense mediated decay
--

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 8,785 bps, Translation length: 1,255 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS19296, CCDS51505, CCDS80286

Version

MGP_C57BL6NJ_T0072217.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.