Transcript: MGP_C57BL6NJ_T0071998.1

Description

F-box and leucine-rich repeat protein 5 [Source:MGI Symbol;Acc:MGI:2152883]

Gene Synonyms

Fbl4, Fir4

Location

Chromosome 5: 44,422,029-44,460,587 reverse strand.

Reference strain equivalent

Fbxl5

About this transcript

This transcript has 11 exons, is annotated with 26 domains and features and maps to 206 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0029955.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0072001.1	-	2073	690aa	MGP_C57BL6NJ_P0072001	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0072003.1	-	4237	623aa	MGP_C57BL6NJ_P0072003	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071999.1	-	2814	689aa	MGP_C57BL6NJ_P0071999	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0071998.1	-	2801	673aa	MGP_C57BL6NJ_P0071998	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19263, CCDS51489	A0A0G2JE06 D3Z584 F6W6I1 F7BZC4 Q8C2S5	-
MGP_C57BL6NJ_T0072000.1	-	2762	684aa	MGP_C57BL6NJ_P0072000	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0072002.1	-	2306	679aa	MGP_C57BL6NJ_P0072002	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0072004.1	-	2144	580aa	MGP_C57BL6NJ_P0072004	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0072008.1	-	374	107aa	MGP_C57BL6NJ_P0072008	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0072007.1	-	3833	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0072006.1	-	2731	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0072005.1	-	397	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,801 bps, Translation length: 673 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C2S5

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS19263, CCDS51489

Version

MGP_C57BL6NJ_T0071998.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0071998.1

Summary

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Transcript: MGP_C57BL6NJ_T0071998.1

Summary

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