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Transcript: MGP_C57BL6NJ_T0070742.1

Description

putative homeodomain transcription factor 2 [Source:MGI Symbol;Acc:MGI:1916020]

Gene Synonyms

1110054G21Rik, 9530062N20Rik, AI447096, C77923

Location

Chromosome 5: 19,639,996-19,770,978 reverse strand.

Reference strain equivalent

Phtf2

About this transcript

This transcript has 18 exons, is annotated with 18 domains and features and maps to 354 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0029740.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0070742.1-4840747aaMGP_C57BL6NJ_P0070742
 
Protein coding
CCDS51426A0A0R4J1Q1 D6RJJ1 F6W0Y3
F6X6S4 		Ensembl Canonical
MGP_C57BL6NJ_T0070743.1-2282169aaMGP_C57BL6NJ_P0070743
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0070745.1-62119aaMGP_C57BL6NJ_P0070745
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0070748.1-48053aaMGP_C57BL6NJ_P0070748
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0070744.1-520No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0070746.1-2044No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0070747.1-2000No protein-
 
Retained intron
--

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 4,840 bps, Translation length: 747 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS51426

Version

MGP_C57BL6NJ_T0070742.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.