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Transcript: MGP_C57BL6NJ_T0069964.1

Description

zinc finger and BTB domain containing 48 [Source:MGI Symbol;Acc:MGI:2140248]

Gene Synonyms

0610011D15Rik, AI327031, Hkr3

Location

Chromosome 4: 161,701,786-161,709,673 reverse strand.

Reference strain equivalent

Zbtb48

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features and maps to 239 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0029598.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0069965.1-2218681aaMGP_C57BL6NJ_P0069965
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0069971.1-655193aaMGP_C57BL6NJ_P0069971
 
Protein coding
--
MGP_C57BL6NJ_T0069964.1-2312547aaMGP_C57BL6NJ_P0069964
 
Nonsense mediated decay
CCDS38982A0A0A0MQG8 F6ZA56 Q1H9T6
-
MGP_C57BL6NJ_T0069969.1-656164aaMGP_C57BL6NJ_P0069969
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0069968.1-502No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0069967.1-406No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0069966.1-2709No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0069970.1-592No protein-
 
Retained intron
--

Summary

Statistics

Exons: 10, Coding exons: 7, Transcript length: 2,312 bps, Translation length: 547 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1H9T6

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS38982

Version

MGP_C57BL6NJ_T0069964.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.