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Transcript: MGP_C57BL6NJ_T0065050.1

Description

syndecan binding protein [Source:MGI Symbol;Acc:MGI:1337026]

Gene Synonyms

MDA-9, Sycl, syndecan interacting protein, syntenin, syntenin-1

Location

Chromosome 4: 3,108,360-3,139,729 forward strand.

Reference strain equivalent

Sdcbp

About this transcript

This transcript has 9 exons, is annotated with 21 domains and features and maps to 271 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0028448.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0065050.1-2745299aaMGP_C57BL6NJ_P0065050
 
Protein coding
CCDS17951, CCDS51110A2AKJ5 A2AKJ6 A2AKJ9
H3BLG5 O08992 Q3TMX0
Ensembl Canonical
MGP_C57BL6NJ_T0065051.1-2086298aaMGP_C57BL6NJ_P0065051
 
Protein coding
--
MGP_C57BL6NJ_T0065056.1-1803199aaMGP_C57BL6NJ_P0065056
 
Protein coding
--
MGP_C57BL6NJ_T0065053.1-975249aaMGP_C57BL6NJ_P0065053
 
Protein coding
--
MGP_C57BL6NJ_T0065057.1-697209aaMGP_C57BL6NJ_P0065057
 
Protein coding
--
MGP_C57BL6NJ_T0065055.1-50691aaMGP_C57BL6NJ_P0065055
 
Protein coding
--
MGP_C57BL6NJ_T0065052.1-2603No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0065054.1-369No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,745 bps, Translation length: 299 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08992

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS17951, CCDS51110

Version

MGP_C57BL6NJ_T0065050.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.