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Transcript: MGP_C57BL6NJ_T0064509.1

Description

PDZ and LIM domain 5 [Source:MGI Symbol;Acc:MGI:1927489]

Gene Synonyms

1110001A05Rik, AI987914, C87059, Enh, Enh1, Enh2, Enh3, LIM

Location

Chromosome 3: 150,476,335-150,637,019 reverse strand.

Reference strain equivalent

Pdlim5

About this transcript

This transcript has 13 exons, is annotated with 43 domains and features and maps to 433 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0028353.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0064510.1-1845614aaMGP_C57BL6NJ_P0064510
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0064509.1-5016591aaMGP_C57BL6NJ_P0064509
 
Protein coding
CCDS17875, CCDS17876, CCDS38656, CCDS57258, CCDS80035, CCDS80036, CCDS80037, CCDS80038, CCDS80039A0A0G2JEJ0 A0A0G2JGZ5 D9J2Z9
D9J300 D9J301 D9J302
D9J303 E9Q8P5 F8WJI6
Q8CI51 Q9CRA2 		-
MGP_C57BL6NJ_T0064517.1-2010239aaMGP_C57BL6NJ_P0064517
 
Protein coding
--
MGP_C57BL6NJ_T0064519.1-1755234aaMGP_C57BL6NJ_P0064519
 
Protein coding
--
MGP_C57BL6NJ_T0064511.1-1725574aaMGP_C57BL6NJ_P0064511
 
Protein coding
--
MGP_C57BL6NJ_T0064518.1-1722214aaMGP_C57BL6NJ_P0064518
 
Protein coding
--
MGP_C57BL6NJ_T0064512.1-1581526aaMGP_C57BL6NJ_P0064512
 
Protein coding
--
MGP_C57BL6NJ_T0064513.1-1555482aaMGP_C57BL6NJ_P0064513
 
Protein coding
--
MGP_C57BL6NJ_T0064520.1-1196337aaMGP_C57BL6NJ_P0064520
 
Protein coding
--
MGP_C57BL6NJ_T0064521.1-873239aaMGP_C57BL6NJ_P0064521
 
Protein coding
--
MGP_C57BL6NJ_T0064516.1-759252aaMGP_C57BL6NJ_P0064516
 
Protein coding
--
MGP_C57BL6NJ_T0064515.1-669222aaMGP_C57BL6NJ_P0064515
 
Protein coding
--
MGP_C57BL6NJ_T0064514.1-2089No protein-
 
Retained intron
--

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 5,016 bps, Translation length: 591 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CI51

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS17875, CCDS17876, CCDS38656, CCDS57258, CCDS80035, CCDS80036, CCDS80037, CCDS80038, CCDS80039

Version

MGP_C57BL6NJ_T0064509.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.