Transcript: MGP_C57BL6NJ_T0064368.1

Description

nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 [Source:MGI Symbol;Acc:MGI:97312]

Gene Synonyms

NF kappaB1, NF-KB1, NF-kappaB, NF-kappaB p50, NF-kappaB1, nuclear factor kappaB p50, p105, p50, p50 subunit of NF kappaB, p50/p105

Location

Chromosome 3: 143,323,708-143,441,257 reverse strand.

Reference strain equivalent

Nfkb1

About this transcript

This transcript has 25 exons, is annotated with 47 domains and features and maps to 293 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0028323.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0064368.1	-	4155	971aa	MGP_C57BL6NJ_P0064368	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17858	A0A0G2JGK6 F6Z9G5 P25799 V9GX90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0064372.1	-	3007	971aa	MGP_C57BL6NJ_P0064372	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0064369.1	-	2354	533aa	MGP_C57BL6NJ_P0064369	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0064373.1	-	3084	128aa	MGP_C57BL6NJ_P0064373	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0064370.1	-	1924	269aa	MGP_C57BL6NJ_P0064370	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0064374.1	-	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0064377.1	-	4023	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0064376.1	-	3383	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0064371.1	-	2520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0064375.1	-	2001	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 25, Coding exons: 23, Transcript length: 4,155 bps, Translation length: 971 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25799

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS17858

Version

MGP_C57BL6NJ_T0064368.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0064368.1

Summary

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Transcript: MGP_C57BL6NJ_T0064368.1

Summary

About Us

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