Ensembl mirror
More ▼
Search »
Mouse C57BL/6NJ (C57BL_6NJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_C57BL6NJ_T0063560.1

Description

S-adenosylhomocysteine hydrolase-like 1 [Source:MGI Symbol;Acc:MGI:2385184]

Gene Synonyms

1110034F20Rik, AA409031, AA414901, Ahcy-rs3, DCAL, IRBIT, Irbit

Location

Chromosome 3: 113,251,255-113,267,406 reverse strand.

Reference strain equivalent

Ahcyl1

About this transcript

This transcript has 15 exons, is annotated with 51 domains and features and maps to 332 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0028170.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0063561.1-3863530aaMGP_C57BL6NJ_P0063561
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0063566.1-831210aaMGP_C57BL6NJ_P0063566
 
Protein coding
--
MGP_C57BL6NJ_T0063560.1-3291181aaMGP_C57BL6NJ_P0063560
 
Nonsense mediated decay
CCDS38593D3Z2Q0 F7ATQ6 Q80SW1
-
MGP_C57BL6NJ_T0063562.1-737No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0063567.1-2580No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0063563.1-1689No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0063564.1-587No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0063565.1-583No protein-
 
Retained intron
--

Summary

Statistics

Exons: 15, Coding exons: 6, Transcript length: 3,291 bps, Translation length: 181 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80SW1

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS38593

Version

MGP_C57BL6NJ_T0063560.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.