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Transcript: MGP_C57BL6NJ_T0062039.1

Description

polyamine-modulated factor 1 [Source:MGI Symbol;Acc:MGI:1914287]

Gene Synonyms

2600009M07Rik, AL033286, AW060657

Location

Chromosome 3: 91,848,891-91,865,071 reverse strand.

Reference strain equivalent

Pmf1

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features and maps to 193 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0027814.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0062039.1-1007202aaMGP_C57BL6NJ_P0062039
 
Protein coding
CCDS38481, CCDS79942A0A0A6YVR2 Q9CPV5 Ensembl Canonical
MGP_C57BL6NJ_T0062040.1-795133aaMGP_C57BL6NJ_P0062040
 
Protein coding
--
MGP_C57BL6NJ_T0062043.1-44081aaMGP_C57BL6NJ_P0062043
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0062041.1-802No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0062044.1-2346No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0062042.1-978No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0062045.1-437No protein-
 
Retained intron
--

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,007 bps, Translation length: 202 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CPV5

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS38481, CCDS79942

Version

MGP_C57BL6NJ_T0062039.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.