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Transcript: MGP_C57BL6NJ_T0061288.1

Description

spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) [Source:MGI Symbol;Acc:MGI:2139806]

Gene Synonyms

AI840044, C79168, Kiaa0610, SPARTIN, TAHCCP1, mKIAA0610

Location

Chromosome 3: 55,897,057-55,922,271 forward strand.

Reference strain equivalent

Spart

About this transcript

This transcript has 9 exons, is annotated with 20 domains and features and maps to 340 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0027639.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0061292.1-3981671aaMGP_C57BL6NJ_P0061292
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0061288.1-3770671aaMGP_C57BL6NJ_P0061288
 
Protein coding
CCDS38432, CCDS50908D3Z1M5 D3Z2D6 D3Z3F8
Q3TVW1 Q8R1X6 		-
MGP_C57BL6NJ_T0061290.1-3567614aaMGP_C57BL6NJ_P0061290
 
Protein coding
--
MGP_C57BL6NJ_T0061293.1-2957582aaMGP_C57BL6NJ_P0061293
 
Protein coding
--
MGP_C57BL6NJ_T0061295.1-473116aaMGP_C57BL6NJ_P0061295
 
Protein coding
--
MGP_C57BL6NJ_T0061294.1-36892aaMGP_C57BL6NJ_P0061294
 
Protein coding
--
MGP_C57BL6NJ_T0061289.1-3239No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0061291.1-2115No protein-
 
Retained intron
--

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,770 bps, Translation length: 671 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8R1X6

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS38432, CCDS50908

Version

MGP_C57BL6NJ_T0061288.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.