Transcript: MGP_C57BL6NJ_T0056741.1

Description

1-aminocyclopropane-1-carboxylate synthase (non-functional) [Source:MGI Symbol;Acc:MGI:1919717]

Gene Synonyms

2610203E10Rik, Phacs

Location

Chromosome 2: 98,595,189-98,611,663 reverse strand.

Reference strain equivalent

Accs

About this transcript

This transcript has 15 exons, is annotated with 16 domains and features and maps to 206 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0026600.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0056741.1	-	3950	502aa	MGP_C57BL6NJ_P0056741	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16457, CCDS71105	A2AIG8 A2AIG9 F6RIQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0056743.1	-	2036	479aa	MGP_C57BL6NJ_P0056743	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0056742.1	-	1872	479aa	MGP_C57BL6NJ_P0056742	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0056749.1	-	573	156aa	MGP_C57BL6NJ_P0056749	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0056746.1	-	769	74aa	MGP_C57BL6NJ_P0056746	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0056752.1	-	728	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0056745.1	-	4170	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0056750.1	-	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0056751.1	-	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0056744.1	-	639	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0056747.1	-	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0056748.1	-	624	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,950 bps, Translation length: 502 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2AIG8

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS16457, CCDS71105

Version

MGP_C57BL6NJ_T0056741.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0056741.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_C57BL6NJ_T0056741.1

Summary

About Us

Get help

Our sister sites

Follow us