Mouse C57BL/6NJ (C57BL_6NJ_v1)
Description

outer dense fiber of sperm tails 2 [Source:MGI Symbol;Acc:MGI:1098824]

Gene Synonyms

AI848335, MMTEST29, Odf84, cenexin

Location
Reference strain equivalent
About this transcript

This transcript has 5 exons, is annotated with 11 domains and features and maps to 63 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0054143.1-3188830aaMGP_C57BL6NJ_P0054143
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0054139.1-3959825aaMGP_C57BL6NJ_P0054139
 
Protein coding
--
MGP_C57BL6NJ_T0054131.1-3826825aaMGP_C57BL6NJ_P0054131
 
Protein coding
--
MGP_C57BL6NJ_T0054135.1-3804825aaMGP_C57BL6NJ_P0054135
 
Protein coding
--
MGP_C57BL6NJ_T0054130.1-3082806aaMGP_C57BL6NJ_P0054130
 
Protein coding
--
MGP_C57BL6NJ_T0054144.1-2450638aaMGP_C57BL6NJ_P0054144
 
Protein coding
--
MGP_C57BL6NJ_T0054140.1-2376638aaMGP_C57BL6NJ_P0054140
 
Protein coding
--
MGP_C57BL6NJ_T0054129.1-2364638aaMGP_C57BL6NJ_P0054129
 
Protein coding
--
MGP_C57BL6NJ_T0054142.1-2353657aaMGP_C57BL6NJ_P0054142
 
Protein coding
--
MGP_C57BL6NJ_T0054136.1-2305652aaMGP_C57BL6NJ_P0054136
 
Protein coding
--
MGP_C57BL6NJ_T0054128.1-2249701aaMGP_C57BL6NJ_P0054128
 
Protein coding
--
MGP_C57BL6NJ_T0054138.1-814270aaMGP_C57BL6NJ_P0054138
 
Protein coding
--
MGP_C57BL6NJ_T0054134.1-658138aaMGP_C57BL6NJ_P0054134
 
Protein coding
--
MGP_C57BL6NJ_T0054126.1-40369aaMGP_C57BL6NJ_P0054126
 
Protein coding
CCDS15861, CCDS50554, CCDS50555, CCDS50556, CCDS50557A3KGV1 A3KGV2 A3KGV3
A3KGV9 A3KGW0 F6Y325
V9GXZ0
-
MGP_C57BL6NJ_T0054132.1-3035680aaMGP_C57BL6NJ_P0054132
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0054147.1-793No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0054146.1-674No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0054133.1-589No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0054145.1-395No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0054141.1-349No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0054149.1-4291No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0054137.1-828No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0054150.1-673No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0054148.1-553No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0054127.1-437No protein-
 
Retained intron
--
Statistics

Exons: 5, Coding exons: 3, Transcript length: 403 bps, Translation length: 69 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A3KGV1

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS15861, CCDS50554, CCDS50555, CCDS50556, CCDS50557

Version

MGP_C57BL6NJ_T0054126.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.