Ensembl mirror
More ▼
Search »
Mouse C57BL/6NJ (C57BL_6NJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_C57BL6NJ_T0052630.1

Description

DNA cross-link repair 1A [Source:MGI Symbol;Acc:MGI:1930042]

Gene Synonyms

2810043H12Rik, AU022226, Pso2, SMN1a, SNM1, Smn1a, Snm1, mKIAA0086, mSNM1

Location

Chromosome 19: 58,258,656-58,277,622 reverse strand.

Reference strain equivalent

Dclre1a

About this transcript

This transcript has 10 exons and maps to 272 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0025679.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0052632.1-40661047aaMGP_C57BL6NJ_P0052632
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0052635.1-89997aaMGP_C57BL6NJ_P0052635
 
Protein coding
--
MGP_C57BL6NJ_T0052630.1-4145314aaMGP_C57BL6NJ_P0052630
 
Nonsense mediated decay
CCDS29917S4R1N2 S4R1T3 S4R284
-
MGP_C57BL6NJ_T0052634.1-322No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0052631.1-4664No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0052633.1-478No protein-
 
Retained intron
--

Summary

Statistics

Exons: 10, Coding exons: 2, Transcript length: 4,145 bps, Translation length: 314 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS29917

Version

MGP_C57BL6NJ_T0052630.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.