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Transcript: MGP_C57BL6NJ_T0051898.1

Description

RIKEN cDNA 4430402I18 gene [Source:MGI Symbol;Acc:MGI:1918036]

Gene Synonyms

AW122618, Spata6l

Location

Chromosome 19: 28,073,628-28,093,343 reverse strand.

Reference strain equivalent

Spata6l

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features and maps to 44 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0025430.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0051902.1-1559401aaMGP_C57BL6NJ_P0051902
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0051898.1-263876aaMGP_C57BL6NJ_P0051898
 
Protein coding
CCDS37948A0A0B4J1N4 B2RV46 B7ZWC9
B7ZWD0 E0CYX4 F6UU42
H3BLJ4 		-
MGP_C57BL6NJ_T0051901.1-2152347aaMGP_C57BL6NJ_P0051901
 
Protein coding
--
MGP_C57BL6NJ_T0051904.1-1066333aaMGP_C57BL6NJ_P0051904
 
Protein coding
--
MGP_C57BL6NJ_T0051905.1-1057330aaMGP_C57BL6NJ_P0051905
 
Protein coding
--
MGP_C57BL6NJ_T0051906.1-38439aaMGP_C57BL6NJ_P0051906
 
Protein coding
--
MGP_C57BL6NJ_T0051900.1-181293aaMGP_C57BL6NJ_P0051900
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0051903.1-460No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 9, Coding exons: 3, Transcript length: 2,638 bps, Translation length: 76 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B2RV46

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS37948

Version

MGP_C57BL6NJ_T0051898.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.