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Transcript: MGP_C57BL6NJ_T0050074.1

Description

sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:MGI Symbol;Acc:MGI:1203727]

Gene Synonyms

A730020P05Rik, AI851735, Sema6A-1, Semaq, VIa, sema

Location

Chromosome 18: 47,707,777-47,753,335 reverse strand.

Reference strain equivalent

Sema6a

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0024828.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0050078.1-43391048aaMGP_C57BL6NJ_P0050078
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0050076.1-69231041aaMGP_C57BL6NJ_P0050076
 
Protein coding
--
MGP_C57BL6NJ_T0050075.1-68561031aaMGP_C57BL6NJ_P0050075
 
Protein coding
--
MGP_C57BL6NJ_T0050077.1-4123976aaMGP_C57BL6NJ_P0050077
 
Protein coding
--
MGP_C57BL6NJ_T0050079.1-32911031aaMGP_C57BL6NJ_P0050079
 
Protein coding
--
MGP_C57BL6NJ_T0050082.1-740216aaMGP_C57BL6NJ_P0050082
 
Protein coding
--
MGP_C57BL6NJ_T0050074.1-652110aaMGP_C57BL6NJ_P0050074
 
Protein coding
CCDS37813, CCDS79642D3YWM8 D3YZJ8 F6WLW8
K3W4S5 O35464 		-
MGP_C57BL6NJ_T0050081.1-3328No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0050080.1-3225No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0050083.1-717No protein-
 
Retained intron
--

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 652 bps, Translation length: 110 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O35464

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS37813, CCDS79642

Version

MGP_C57BL6NJ_T0050074.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.