Transcript: MGP_C57BL6NJ_T0049916.1

Description

RELT-like 2 [Source:MGI Symbol;Acc:MGI:1918044]

Gene Synonyms

4631403P03Rik, ependolin

Location

Chromosome 18: 37,677,266-37,681,374 forward strand.

Reference strain equivalent

Rell2

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features and maps to 177 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0024765.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0049916.1	-	2255	303aa	MGP_C57BL6NJ_P0049916	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29195	E9PX33 E9Q2K0 E9Q3X7 E9Q812 E9Q872 H3BJY5 Q8BRJ3 Q8CFT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0049920.1	-	1995	294aa	MGP_C57BL6NJ_P0049920	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0049919.1	-	801	135aa	MGP_C57BL6NJ_P0049919	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0049918.1	-	2091	148aa	MGP_C57BL6NJ_P0049918	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0049917.1	-	1965	86aa	MGP_C57BL6NJ_P0049917	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0049922.1	-	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0049921.1	-	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 2,255 bps, Translation length: 303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BRJ3

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS29195

Version

MGP_C57BL6NJ_T0049916.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0049916.1

Summary

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Transcript: MGP_C57BL6NJ_T0049916.1

Summary

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