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Transcript: MGP_C57BL6NJ_T0049560.1

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:MGI Symbol;Acc:MGI:894693]

Gene Synonyms

ppGaNTase-T1

Location

Chromosome 18: 22,868,220-22,962,572 forward strand.

Reference strain equivalent

Galnt1

About this transcript

This transcript has 14 exons, is annotated with 16 domains and features and maps to 334 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0024606.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0049561.1-4108559aaMGP_C57BL6NJ_P0049561
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0049560.1-3977559aaMGP_C57BL6NJ_P0049560
 
Protein coding
CCDS29100E9PVK6 E9Q0U0 F6PYE1
O08912 		-
MGP_C57BL6NJ_T0049563.1-3796559aaMGP_C57BL6NJ_P0049563
 
Protein coding
--
MGP_C57BL6NJ_T0049562.1-980142aaMGP_C57BL6NJ_P0049562
 
Protein coding
--
MGP_C57BL6NJ_T0049565.1-72077aaMGP_C57BL6NJ_P0049565
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0049564.1-67862aaMGP_C57BL6NJ_P0049564
 
Nonsense mediated decay
--

Summary

Statistics

Exons: 14, Coding exons: 11, Transcript length: 3,977 bps, Translation length: 559 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08912

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS29100

Version

MGP_C57BL6NJ_T0049560.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.