Transcript: MGP_C57BL6NJ_T0047899.1

Description

flotillin 1 [Source:MGI Symbol;Acc:MGI:1100500]

Gene Synonyms

reggie-2

Location

Chromosome 17: 37,489,297-37,498,848 forward strand.

Reference strain equivalent

Flot1

About this transcript

This transcript has 13 exons, is annotated with 16 domains and features and maps to 270 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0024055.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0047899.1	-	1825	428aa	MGP_C57BL6NJ_P0047899	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28705	G3UWW8 G3UYU4 G3UZZ5 G3XA73 O08917 Q540I4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0047900.1	-	1383	380aa	MGP_C57BL6NJ_P0047900	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0047905.1	-	805	192aa	MGP_C57BL6NJ_P0047905	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0047903.1	-	697	192aa	MGP_C57BL6NJ_P0047903	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0047904.1	-	651	196aa	MGP_C57BL6NJ_P0047904	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0047901.1	-	948	40aa	MGP_C57BL6NJ_P0047901	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0047909.1	-	682	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0047908.1	-	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0047906.1	-	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0047907.1	-	502	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0047902.1	-	405	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,825 bps, Translation length: 428 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08917

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS28705

Version

MGP_C57BL6NJ_T0047899.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0047899.1

Summary

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Transcript: MGP_C57BL6NJ_T0047899.1

Summary

About Us

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