Ensembl mirror
More ▼
Search »
Mouse C57BL/6NJ (C57BL_6NJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_C57BL6NJ_T0047175.1

Description

Pbx/knotted 1 homeobox [Source:MGI Symbol;Acc:MGI:1201409]

Gene Synonyms

D17Wsu76e, PREP1

Location

Chromosome 17: 32,427,426-32,473,846 forward strand.

Reference strain equivalent

Pknox1

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features and maps to 189 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0023896.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0047178.1-4232436aaMGP_C57BL6NJ_P0047178
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0047177.1-4171436aaMGP_C57BL6NJ_P0047177
 
Protein coding
--
MGP_C57BL6NJ_T0047175.1-2271436aaMGP_C57BL6NJ_P0047175
 
Protein coding
CCDS28608O70477 -
MGP_C57BL6NJ_T0047179.1-161No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0047176.1-1854No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0047180.1-689No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0047181.1-523No protein-
 
Retained intron
--

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,271 bps, Translation length: 436 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O70477

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS28608

Version

MGP_C57BL6NJ_T0047175.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.