Transcript: MGP_C57BL6NJ_T0046615.1

Description

nuclear prelamin A recognition factor-like [Source:MGI Symbol;Acc:MGI:1914813]

Gene Synonyms

9030612I22Rik, AI504405, PRN

Location

Chromosome 17: 25,920,939-25,932,340 forward strand.

Reference strain equivalent

Ciao3

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features and maps to 208 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0023771.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0046616.1	-	2062	492aa	MGP_C57BL6NJ_P0046616	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0046615.1	-	2555	476aa	MGP_C57BL6NJ_P0046615	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50034	D6RJ43 Q7TMW6	-
MGP_C57BL6NJ_T0046618.1	-	612	73aa	MGP_C57BL6NJ_P0046618	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0046619.1	-	3016	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0046620.1	-	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0046617.1	-	261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,555 bps, Translation length: 476 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7TMW6

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS50034

Version

MGP_C57BL6NJ_T0046615.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0046615.1

Summary

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Transcript: MGP_C57BL6NJ_T0046615.1

Summary

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