Transcript: MGP_C57BL6NJ_T0045386.1

Description

ubiquitin specific peptidase 16 [Source:MGI Symbol;Acc:MGI:1921362]

Gene Synonyms

1200004E02Rik, 2810483I07Rik, 6330514E22Rik, UBP-M, UBPM

Location

Chromosome 16: 91,038,002-91,045,097 forward strand.

Reference strain equivalent

Usp16

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features and maps to 44 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0023395.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0045391.1	-	2624	825aa	MGP_C57BL6NJ_P0045391	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0045386.1	-	354	48aa	MGP_C57BL6NJ_P0045386	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28291	D3YVU1 D3Z6E6 D6RHQ6 Q99LG0	-
MGP_C57BL6NJ_T0045390.1	-	2561	334aa	MGP_C57BL6NJ_P0045390	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0045389.1	-	354	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0045392.1	-	3582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0045387.1	-	3002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0045388.1	-	1405	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0045394.1	-	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0045393.1	-	502	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0045395.1	-	358	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 354 bps, Translation length: 48 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99LG0

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS28291

Version

MGP_C57BL6NJ_T0045386.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0045386.1

Summary

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Transcript: MGP_C57BL6NJ_T0045386.1

Summary

About Us

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