Transcript: MGP_C57BL6NJ_T0042706.1

Description

RAB, member RAS oncogene family-like 2 [Source:MGI Symbol;Acc:MGI:1915958]

Gene Synonyms

1110031N17Rik, AW549303, Rabl2a

Location

Chromosome 15: 94,097,183-94,106,569 reverse strand.

Reference strain equivalent

Rabl2

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features and maps to 186 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0022651.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0042706.1	-	1640	223aa	MGP_C57BL6NJ_P0042706	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49704	E9PZU3 E9Q0F8 E9Q473 E9Q8G6 E9Q9D5 F6Y6I9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0042708.1	-	1322	138aa	MGP_C57BL6NJ_P0042708	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0042713.1	-	170	56aa	MGP_C57BL6NJ_P0042713	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0042709.1	-	889	103aa	MGP_C57BL6NJ_P0042709	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0042712.1	-	867	64aa	MGP_C57BL6NJ_P0042712	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0042714.1	-	851	74aa	MGP_C57BL6NJ_P0042714	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0042711.1	-	483	61aa	MGP_C57BL6NJ_P0042711	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0042716.1	-	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0042707.1	-	1765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0042715.1	-	1032	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0042710.1	-	835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,640 bps, Translation length: 223 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: E9Q9D5

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS49704

Version

MGP_C57BL6NJ_T0042706.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0042706.1

Summary

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Transcript: MGP_C57BL6NJ_T0042706.1

Summary

About Us

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