Transcript: MGP_C57BL6NJ_T0041906.1

Description

tonsoku-like, DNA repair protein [Source:MGI Symbol;Acc:MGI:1919999]

Gene Synonyms

1110014J03Rik, 2810439M11Rik, CIIA, D730005C08Rik, Nfkbil2

Location

Chromosome 15: 79,574,874-79,578,813 reverse strand.

Reference strain equivalent

Tonsl

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features and maps to 228 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0022409.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0041908.1	-	4235	1363aa	MGP_C57BL6NJ_P0041908	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0041906.1	-	885	221aa	MGP_C57BL6NJ_P0041906	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27579, CCDS27580	E9PZL7 E9Q2M2 F7A0T4 F7A431 G3UW83 Q9D1C8	-
MGP_C57BL6NJ_T0041907.1	-	743	85aa	MGP_C57BL6NJ_P0041907	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0041914.1	-	471	64aa	MGP_C57BL6NJ_P0041914	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0041911.1	-	2932	417aa	MGP_C57BL6NJ_P0041911	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0041910.1	-	713	83aa	MGP_C57BL6NJ_P0041910	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0041909.1	-	502	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0041912.1	-	491	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0041913.1	-	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 885 bps, Translation length: 221 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D1C8

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS27579, CCDS27580

Version

MGP_C57BL6NJ_T0041906.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0041906.1

Summary

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Transcript: MGP_C57BL6NJ_T0041906.1

Summary

About Us

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